yvaD [2019-06-12 10:09:46]

similar to multidrug-efflux transporter

locus: BSU33560

pI: 8.43

mw: 15.72 kDa

protein length: 133 aa

gene length: 402 bp

function: unknown

product: subunit of unidentified multidrug transporter

essential: no

synonyms

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.14|Multidrug exporters]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 3,448,295 → 3,448,696

The protein

Protein family

• paired small multidrug resistance protein family ([SW|PSMR family]) [Pubmed|17942072]

Expression and Regulation

Operons

• genes: [gene|97CE9735931D02E6E780C955C9BE3A67E5C4C59A|yvaF]-[gene|230D790937DAFB82A04B8597699115E1C1EAE98E|yvaE]-[gene|B7FBC30B744D8B1F26AFC5DCB297FAFAB5C60FB7|yvaD]
  description: [pubmed|22383849]

Biological materials

Mutant

• MGNA-B605 (yvaD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1604 NBRP B. subtilis, Japan]
• BKE33560 (Δ[gene|B7FBC30B744D8B1F26AFC5DCB297FAFAB5C60FB7|yvaD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TCTCATTTGTACTGCCCGCT, downstream forward: _UP4_TGACAGGTGCCGCTTTTATA
• BKK33560 (Δ[gene|B7FBC30B744D8B1F26AFC5DCB297FAFAB5C60FB7|yvaD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TCTCATTTGTACTGCCCGCT, downstream forward: _UP4_TGACAGGTGCCGCTTTTATA

References

Reviews

• 17942072